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--- decontamination_using_read_classifier_a.k.a_eukfinder [2025/10/16 11:26] – 134.190.250.136
+++ decontamination_using_read_classifier_a.k.a_eukfinder [2026/01/21 12:34] (current) – 172.20.46.175
@@ Line 20: / Line 20: @@
 Tips and Tricks Talk Slides:
 https://perun.biochem.dal.ca/downloads/icgvideo/TAT/TT_Apr24_Eukfinder_Anvio.pdf
+**Warning!** Eukfinder is not deadlock-safe, please avoid running parallel instances!
 -----------------------------------------------------------
@@ Line 36: / Line 38: @@
 . Only Centrifuge_DB and PLAST_DB are required.
-. Eukfinder v1.2.4 is not yet installed globally on Perun.
+<Last updated by Jason Shao on Jan 21, 2026>
-//How to Run Eukfinder v1.2.4 on Perun//
-   export PATH=/scratch5/software/miniconda3/bin:$PATH
-   source activate eukfinder
-   eukfinder [arguments]
-<Last updated by Jason Shao on October 16th, 2025>