User Tools

Site Tools


diamond_blast

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
diamond_blast [2017/09/11 06:10] 129.173.94.20diamond_blast [2017/09/11 06:12] (current) 129.173.94.20
Line 9: Line 9:
 2- Run diamond:\\ 2- Run diamond:\\
 <code> <code>
-diamond blastp --threads 8 -d <database> -q <query_file> -a <output_file> --salltitles --max-target-seqs 2000 --evalue 0.00001 --more-sensitive+diamond blastp --threads 8 -d <database> -q <query_file> -a <output_file_as_DIAMOND_alignment_archive> --salltitles --max-target-seqs 2000 --evalue 0.00001 --more-sensitive
 </code> </code>
    * Name the output file with the extension daa (DIAMOND alignment archive).\\    * Name the output file with the extension daa (DIAMOND alignment archive).\\
diamond_blast.1505121047.txt.gz · Last modified: by 129.173.94.20