ortologs_searches_using_panther_hmmrs
Differences
This shows you the differences between two versions of the page.
| Both sides previous revisionPrevious revisionNext revision | Previous revision | ||
| ortologs_searches_using_panther_hmmrs [2023/05/01 16:03] – [Step 4:** Parsing HMM outputs and creating inputs for a second HMM search] 134.190.232.186 | ortologs_searches_using_panther_hmmrs [2023/05/04 10:50] (current) – [Step 6: Parsing HMM outpus and creating inputs for a second HMM search] 134.190.232.186 | ||
|---|---|---|---|
| Line 212: | Line 212: | ||
| qsub Panther.HmmrSearch.sh2 | qsub Panther.HmmrSearch.sh2 | ||
| - | ==== Step 6: Parsing HMM outpus | + | ==== Step 6: Parsing HMM outputs |
| Parsing the HMM outputs | Parsing the HMM outputs | ||
| Line 228: | Line 228: | ||
| 7) Create an input file (Input4ETE) to be later applied with the ETE_standAlone1.4.py script | 7) Create an input file (Input4ETE) to be later applied with the ETE_standAlone1.4.py script | ||
| - | ==== Step 6: Start the tree search by submitting your jobs ==== | + | ==== Step 7: Start the tree search by submitting your jobs ==== |
| ls -1 *Reconstruction.sh > list_of_shells | ls -1 *Reconstruction.sh > list_of_shells | ||
ortologs_searches_using_panther_hmmrs.1682967822.txt.gz · Last modified: by 134.190.232.186