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running_alphafold_at_scale [2026/03/11 11:49] 172.20.80.5running_alphafold_at_scale [2026/03/11 11:51] (current) 172.20.80.5
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 === Submitting AlphaFold as an array job === === Submitting AlphaFold as an array job ===
  
-If you want to run AlphaFold on many proteins, it may be pragmatic to submit these sequence databases searches as an **array job** on Perun. An array-job is a single job, that in turn schedules the submission of many other jobs. Here the idea is to submit a single general "AlphaFold sequence search job" which then schedules and submits all the individual search jobs for each query protein separately.+If you want to run AlphaFold on many proteins, it may be pragmatic to submit these sequence database searches as an **array job** on Perun. An array-job is a single job, that in turn schedules the submission of many other jobs. Here the idea is to submit a single general "AlphaFold sequence search job" which then schedules and submits all the individual search jobs for each query protein separately.
  
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running_alphafold_at_scale.txt · Last modified: by 172.20.80.5