who_looks_after_which_page
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| Both sides previous revisionPrevious revisionNext revision | Previous revision | ||
| who_looks_after_which_page [2019/09/09 08:00] – 24.138.68.92 | who_looks_after_which_page [2024/10/28 09:51] (current) – 134.190.221.230 | ||
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| + | =====This page is quite obsolete - Jason===== | ||
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| Distinguishin LGT from contaminants | Distinguishin LGT from contaminants | ||
| Line 13: | Line 15: | ||
| Decontamination using read classifier (a.k.a Eukfinder) -Dayana | Decontamination using read classifier (a.k.a Eukfinder) -Dayana | ||
| - | Multi-gene phylogeny pipeline | + | Multi-gene phylogeny pipeline |
| TransDecoder for transcriptomes | TransDecoder for transcriptomes | ||
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| Cleaning of Illumina Paired end reads | Cleaning of Illumina Paired end reads | ||
| - | Benchmarking Universal Single-Copy Orthologs (BUSCO) | + | Benchmarking Universal Single-Copy Orthologs (BUSCO) |
| Trinity for assembling transcript reads | Trinity for assembling transcript reads | ||
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| From Nanopore to Gene Prediction | From Nanopore to Gene Prediction | ||
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| + | Short read assembly | ||
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| + | Python Resources | ||
| + | |||
| + | depth and breadth of coverage | ||
| + | |||
| + | Binning tools | ||
| + | |||
| + | Visualizing mitochondrial genomes | ||
who_looks_after_which_page.1568026853.txt.gz · Last modified: by 24.138.68.92