User Tools

Site Tools


taxonomy_recovery

This is an old revision of the document!


Quick taxonomy recovery using the Accession numbers from either a Blast or Plast output:

use acc2tax program available in the environmental path.

here is an example of how to run it:

 acc2tax -i /db1/extra-data-sets/Acc2tax/acc2taxIN_example -p -d /db1/extra-data-sets/Acc2tax/Acc2Tax_071119 -o taxonomy.out

don't forget to make sure that your input file contains only the accession numbers without their version, see the example file given above.

taxonomy_recovery.1562928662.txt.gz · Last modified: by 24.138.71.142