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gene_prediction_curation_with_igv [2025/02/03 12:23] – [Validating curated gene models] 134.190.144.162gene_prediction_curation_with_igv [2025/08/07 16:01] (current) – 134.190.145.228
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 You can play with the window size ''-W'' and overlap ''-s'' parameters to fine tune it to your own liking. You can either load in this track via ''File -> Load From File ..'' or through the JSON file (see below) You can play with the window size ''-W'' and overlap ''-s'' parameters to fine tune it to your own liking. You can either load in this track via ''File -> Load From File ..'' or through the JSON file (see below)
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 ==== Loading into IGV ==== ==== Loading into IGV ====
  
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 For some frustratingly unknow reason, IGV only displays the three forward frames, OR the three reverse frames. It is, as far as I know, not possible to display all six frames simultaneously. To swap between reverse and forward frames, click on small arrow of the //Sequence// track. To see the sequence track, you need to be sufficiently zoomed in. For some frustratingly unknow reason, IGV only displays the three forward frames, OR the three reverse frames. It is, as far as I know, not possible to display all six frames simultaneously. To swap between reverse and forward frames, click on small arrow of the //Sequence// track. To see the sequence track, you need to be sufficiently zoomed in.
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 ==== Curating gene models ==== ==== Curating gene models ====
  
gene_prediction_curation_with_igv.1738599816.txt.gz · Last modified: by 134.190.144.162