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--- phylogeny_protocol4 [2022/05/23 12:04] – 134.190.232.106
+++ phylogeny_protocol4 [2022/06/17 11:58] (current) – 134.190.144.108
@@ Line 1: / Line 1: @@
-Tree construction including steps of aligning, trimming, building, collapsing, colouring etc.
+**Tree construction including steps of aligning, trimming, building, collapsing, colouring etc.
+**
+  - TreeTuner: A pipeline for minimizing redundancy and complexity in large phylogenetic datasets(2022)
+  - TreeDecorator: The downstream analysis package of tree colouring and collapsing of tree building, the review of tree building methods (2023)
+  - An overview of online resources for tree trimming in large phylogenetic datasets: Mini review (2023)
 color_newick_tree.py script and example can be found via the link https://github.com/zx0223winner/TreeTuner/